Insertion junction: CLIP2.047518_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047518
Chromosome:chromosome 17
Location:2458035
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g715200 (1 of 21) IPR001611//IPR003591 - Leucine-rich repeat // Leucine-rich repeat, typical subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTCTCTATGAACGGCTACCCTCCATCCCCTTCTCAGTAGAGTTGCCT
Internal bar code:TTTGCTTAGCTTGCAGGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3553
LEAP-Seq percent confirming:50.8772
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGAATCCCTCAACACTCC
Suggested primer 2:ATTGCACCAACGCACACTTC