Insertion junction: CLIP2.047519_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047519
Chromosome:chromosome 12
Location:2933404
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g502400 (1 of 1) PTHR23423:SF17 - PROTEIN F40E10.6 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCCTCTCCCACCCTCGGACAGGAGACCGCCCTGGACCACACAATGCTG
Internal bar code:CTCGAACGACGTCGTCGGATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1733
LEAP-Seq percent confirming:84.7826
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:46

Suggested primers for confirmation by PCR

Suggested primer 1:AACTCACACTGCATCGCTCA
Suggested primer 2:TATGCAGCGTGCCTGTAACA