Insertion junction: CLIP2.047524_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047524
Chromosome:chromosome 12
Location:4637132
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g522150 FAP194 (1 of 239) IPR016024 - Armadillo-type fold; Flagellar Associated Protein 194 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATACCCAGGCTGGTGCGGTTGCACAGCGCATCATTTTCGTCGGAGCTC
Internal bar code:TCTAATTAATAACTAGAGGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1347
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TCTACTACCACCGCCACAGA
Suggested primer 2:TACCTGGCGATGGAGAAGGA