Insertion junction: CLIP2.047536_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047536
Chromosome:chromosome 16
Location:6227448
Confidence (%):63
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00152018

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGTGACCCATGAACCCGGTAAGGGACCGCCTGCAATACTCACTCAC
Internal bar code:CAGGAAATTCGTTTTCGCTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:781
LEAP-Seq percent confirming:42.4242
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CTATTAGAAACCCGCCCGCT
Suggested primer 2:TCCGTGAAGCGATTGTTGGA