Insertion junction: CLIP2.047537_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047537
Chromosome:chromosome 6
Location:4842517
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280250 (1 of 1) PTHR31018:SF3 - CELL WALL MANNOPROTEIN PST1-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCAATCCCGTAGCCTTCGTCCATCCGCAAACCTGCACCACGTCACGGC
Internal bar code:ACGGGGGGTAAGATTAAAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1994
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGATCCACGCAAAATCCG
Suggested primer 2:ACATGACAATGCCCTGCGTA