Insertion junction: CLIP2.047541_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047541
Chromosome:chromosome 3
Location:4307021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174200 (1 of 9) IPR000210//IPR011042//IPR011333 - BTB/POZ domain // Six-bladed beta-propeller, TolB-like // POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGACCTGCCCTACCCCCTGGCCCCCTTCCAGACGCCTGTCGCGCCGC
Internal bar code:GGCTGTAAATGCACTTTGATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2239
LEAP-Seq percent confirming:37.037
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TATAACCGTACGGCGACTGC
Suggested primer 2:TGAGGCAGCTTCCATGAAGG