Insertion junction: CLIP2.047546_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047546
Chromosome:chromosome 3
Location:4431847
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175351 LMR2 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAAAGAGTGGCAGCGACAGTAGCTGATGCAGAAGCTGATCTAAAGCAC
Internal bar code:TCTGGAGTCGGGAATACGTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:972
LEAP-Seq percent confirming:68.1818
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTGTGGCAATGCATGTG
Suggested primer 2:AGCTAACGCCACAGCTTCAT