Insertion junction: CLIP2.047548_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047548
Chromosome:chromosome 10
Location:1518687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g428720 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATCAAGGACCCCAACACCAGCTTCCAGTAACACGCCGCGGAGGCCTG
Internal bar code:TGTGAGATTAGACAGTCTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:4906
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:89
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAACAAGATCTCGTGCT
Suggested primer 2:GTACCTCATGAACGCCACCA