Insertion junction: CLIP2.047551_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047551
Chromosome:chromosome 6
Location:4848064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g280300 (1 of 1) PTHR11254//PTHR11254:SF324 - HECT DOMAIN UBIQUITIN-PROTEIN LIGASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAAAATAAAGCGCGGGGTGGGGCGGTTTGGGCGCGTCAGTCACCTGCT
Internal bar code:ACCGCTAGGGTCGCCCTAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3569
LEAP-Seq percent confirming:84.4828
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTTTGTTTTGTGCGCACC
Suggested primer 2:TATGCGGTCTTTGTGGGGAC