Insertion junction: CLIP2.047555_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047555
Chromosome:chromosome 10
Location:4139168
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g448700 (1 of 1) K11650 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D (SMARCD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGACCCATTCGTTGGGCGCTAGGCACACTATCTCCCGCTCCCCCGCC
Internal bar code:CTTTTTACGCGATGGTACTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2168
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGCAAATCACACACCAG
Suggested primer 2:GCATGTGTGTCGCGTATGAC