Insertion junction: CLIP2.047570_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047570
Chromosome:chromosome 3
Location:4535502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g176000 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTATTTTCCTCGCGTCTGGGCTCGCTGAACCTGAGTTTCACCTCCAACT
Internal bar code:TATCTACTTAGGGAAACTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1784
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGTGCTTAGCCGGTTAA
Suggested primer 2:CCTGAGTCAGCACCTTAGGC