Insertion junction: CLIP2.047575_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047575
Chromosome:chromosome 2
Location:1593504
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085000 (1 of 1) PTHR22847//PTHR22847:SF423 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCAAAGGCAGGGGGAGGGGTTTAAGTAGGAGGACCGTTACTTCAAGG
Internal bar code:TTGTGTTGCTGGCTCGTTGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:183
LEAP-Seq percent confirming:76.9231
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCACATAATCCCCTCTC
Suggested primer 2:AGAGAACTGCGGTCTTCGTG