Insertion junction: CLIP2.047580_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047580
Chromosome:chromosome 9
Location:1499852
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399550 (1 of 1) PTHR10857//PTHR10857:SF11 - COPINE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAGGTGCGAGCAGTGAATGAGTGATGGGTGTGTTTGTGGTTTGCTTA
Internal bar code:GTGGCCTCCCGTAATAGTGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:786
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CCATACATTGCAAGGACGCG
Suggested primer 2:GCCAAGTCAACACCGGAAAC