Insertion junction: CLIP2.047581_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047581
Chromosome:chromosome 16
Location:6766666
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g672450 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGACTACACGGCTGGTGGAGTGGTTGGAGTCGCACGACCAGCAGCCG
Internal bar code:TGGTATGATATATATCAAGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2328
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCATCCAAGCCGTAGCAATG
Suggested primer 2:CGCCATACATCGACATGTGC