Insertion junction: CLIP2.047582_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047582
Chromosome:chromosome 12
Location:7958384
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g552851 OGT1 (1 of 1) PTHR23083//PTHR23083:SF397 - TETRATRICOPEPTIDE REPEAT PROTEIN, TPR // UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE SPINDLY-RELATED; O-linked N-acetylglucosamine transferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCAGCCCCTCATTCCTTGCCTGCAAACCCCTGATCCTTTCCTGCTCCTT
Internal bar code:ATCGGGTTTCTTCATTGTCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1468
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCTTCCCGTGTGCTCTC
Suggested primer 2:TCATGTACGAGATGGCGCTC