Insertion junction: CLIP2.047590_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047590
Chromosome:chromosome 10
Location:898561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g423900 (1 of 1) IPR001041//IPR003611 - 2Fe-2S ferredoxin-type iron-sulfur binding domain // Nuclease associated modular domain 3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGCAAGGTGCGGGCCAGAGTCCAGAAGTTCCGGGCCAAGAAGGCCAA
Internal bar code:TAAACTGAGATGGGCACGATAC

Confirmation - LEAP-Seq

LEAP-Seq distance:785
LEAP-Seq percent confirming:25.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCTATACATGCGCCAGCT
Suggested primer 2:GACGGACATCCTTTCCAGCA