Insertion junction: CLIP2.047600_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047600
Chromosome:chromosome 10
Location:6168075
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g462500 PUS16 (1 of 1) 5.4.99.42 - tRNA pseudouridine(31) synthase; RNA pseudouridine synthase intron
Cre10.g462550 (1 of 34) IPR001878 - Zinc finger, CCHC-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGATCACTGCGAGTGAGACCTGATCACTGCGCGAGACGCCAGCGGTTGA
Internal bar code:TTTCTGCCTGCGATATCGAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1742
LEAP-Seq percent confirming:29.0323
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGGTAGCTCTCTGGCTTA
Suggested primer 2:GGCCATTGCAGAGGAGTTCT