Insertion cassette: | CIB2 |
Side of cassette: | 3' |
Strand: | - |
Strain: | CLIP2.047600 |
Chromosome: | chromosome 10 |
Location: | 6168075 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre10.g462500 | PUS16 | (1 of 1) 5.4.99.42 - tRNA pseudouridine(31) synthase; RNA pseudouridine synthase | intron |
Cre10.g462550 | (1 of 34) IPR001878 - Zinc finger, CCHC-type | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CTGATCACTGCGAGTGAGACCTGATCACTGCGCGAGACGCCAGCGGTTGA |
Internal bar code: | TTTCTGCCTGCGATATCGAAGG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 1742 |
LEAP-Seq percent confirming: | 29.0323 |
LEAP-Seq n confirming: | 18 |
LEAP-Seq n nonconfirming: | 44 |
LEAP-Seq n unique pos: | 62 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | ACGGGTAGCTCTCTGGCTTA |
Suggested primer 2: | GGCCATTGCAGAGGAGTTCT |