Insertion junction: CLIP2.047606_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047606
Chromosome:chromosome 17
Location:1818242
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g709300 (1 of 1) PF10009 - Uncharacterized protein conserved in bacteria (DUF2252) (DUF2252) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGTTAAGCGCACGCTGGCAGGGCCTGGGGAGGCTGTCGCCCTCATCCTG
Internal bar code:GGTAGAGGCCTGTTTGGGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1483
LEAP-Seq percent confirming:21.4286
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGTCTCGAAGCTGGTTGG
Suggested primer 2:CACCACGTGTGCTCAGGTAT