Insertion junction: CLIP2.047607_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047607
Chromosome:chromosome 5
Location:1554875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234665 AP4B4 Beta4-Adaptin; (1 of 1) PTHR11134:SF4 - AP-4 COMPLEX SUBUNIT BETA-1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTGCTCTGCCCAACCCACCAAGGCCTGTCCATCACCGCCATCTCTA
Internal bar code:TGTCTAAAGATATGAACAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2587
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCGTGATGTGTGTGTGTG
Suggested primer 2:CAGACCTGTTGGACCTGGAC