Insertion junction: CLIP2.047625_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047625
Chromosome:chromosome 17
Location:1352080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705843 Chlamydomonas-specific family W protein; (1 of 6) PF06701 - Mib_herc2 (MIB_HERC2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACACGGAGACCCTGAGACCGCGCGCCGTTGCGTCTTGCCACCTGCC
Internal bar code:TCCAATCTGTTAACCTCGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:3880
LEAP-Seq percent confirming:55.914
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGTATGCGGAAGGAGG
Suggested primer 2:TTCCTTGCATATGCGCAGGA