Insertion junction: CLIP2.047630_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047630
Chromosome:chromosome 3
Location:391177
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144767 (1 of 1) IPR002761//IPR014729 - Diphthamide synthase domain // Rossmann-like alpha/beta/alpha sandwich fold CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCGCGGCATGAAGCTGCTGCACACGTCCAGCATGTCACCGGTGGCCAG
Internal bar code:TAGCATTTCAGTTATAATTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1576
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTAGCACACCTTCCCAAT
Suggested primer 2:TTGCCTGATCAGATTGCCGT