Insertion junction: CLIP2.047631_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047631
Chromosome:chromosome 12
Location:9110264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g544050 (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGCGTTTCCCACCTGGGTCAGCGGCGAAAACATATCCTGGGGCGAGCC
Internal bar code:GATACTAAGATGGGCATTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:260
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCGCAGTGTTACGATTG
Suggested primer 2:ACAGCACGGTACCTAACACG