Insertion junction: CLIP2.047644_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047644
Chromosome:chromosome 3
Location:348135
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre03.g144607 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGAGGCTTACTCGTTGGGCTCTGGCATCTAACGGGCATCTAACCCCC
Internal bar code:AGTCGAGATCAATTTTTGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:226
LEAP-Seq percent confirming:25.974
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:57
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGATTACCGTGGGCGA
Suggested primer 2:ACCTTTCACCACAGCACACA