Insertion junction: CLIP2.047647_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047647
Chromosome:chromosome 3
Location:4318973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g174400 CDO1 Cysteine dioxygenase, regulated by copper nutrition; (1 of 2) 1.13.11.20 - Cysteine dioxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTTAAACCCTACCTGCTGTCACTCACGCAAGCTACTAATCGCACTTGT
Internal bar code:AATGGGGAAGGGGCTTCCTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4478
LEAP-Seq percent confirming:67.0103
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGGAAGGGAAGGTCAGC
Suggested primer 2:AGAAACCCAGTCGCTTCAGG