Insertion junction: CLIP2.047649_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047649
Chromosome:chromosome 4
Location:3967916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g231614 (1 of 1) IPR001611//IPR003591//IPR023353 - Leucine-rich repeat // Leucine-rich repeat, typical subtype // LemA-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCCATACCCCAGTTTATCAGGGGCTGCGCCCAGGCGCCTCCTGCTGCT
Internal bar code:CGTGCCCGGTGCGCACGAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3497
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:102

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTTCACGCAGCAGCAGTT
Suggested primer 2:GGAGGTTCTGGAGGTTGCAA