Insertion junction: CLIP2.047652_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047652
Chromosome:chromosome 5
Location:2411712
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g238550 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGTAACCAGTTGATACCCTGCCCGCCCTCAGCCCCAGCGCCGTCGGG
Internal bar code:CACGTGTCAAGCATTTAGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1334
LEAP-Seq percent confirming:20.6897
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GAACTGAAAGCTGGGCATGC
Suggested primer 2:CAATGGGGCTACAGCAGTCA