Insertion junction: CLIP2.047656_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047656
Chromosome:chromosome 7
Location:1090800
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g320200 (1 of 1) PTHR23244:SF208 - F14M2.9 PROTEIN-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGACGGTTCAGCTGAACTCGACAGACCGAGCTCCTTGCATCTGTCATT
Internal bar code:AGGTAACTTACCAAAGATTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1192
LEAP-Seq percent confirming:28.5714
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:50
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAATGCAGGTAGGCTTGG
Suggested primer 2:GAGCATCAGAGGTCAGGACG