Insertion junction: CLIP2.047663_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047663
Chromosome:chromosome 4
Location:3584624
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228550 (1 of 2) PTHR31140//PTHR31140:SF1 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTGGCCCACCAGTTGGTGGCGGCCTTGTGGCCCGCGTCCTCCTCGTC
Internal bar code:TGCACGCACGGGAGTGTGTAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:81.8182
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTGTTCTCCAAGCTCAT
Suggested primer 2:GATGGGGGAGAGGTGGATCT