Insertion junction: CLIP2.047671_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047671
Chromosome:chromosome 6
Location:2357759
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g267900 (1 of 1) PTHR12859:SF0 - PROTEIN PRAF-3, ISOFORM A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGTGGGGCTGGGGACAGCGCTCTGCAACGACCCGTTCGCCACCTCGCT
Internal bar code:TATCGTGAAGAAATCAGTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:3504
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGCGTATGTGTATGCG
Suggested primer 2:TTCTCCACCGCAGACACTTC