Insertion junction: CLIP2.047676_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047676
Chromosome:chromosome 16
Location:1827473
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g655400 (1 of 1) K17985 - activating molecule in BECN1-regulated autophagy protein 1 (AMBRA1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGCCACCAGCCTCAACAGCTTCATTCCCAGCAGCCCGAACCCCTGGC
Internal bar code:CATAAGCCATGTAGTGTATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1187
LEAP-Seq percent confirming:54.5455
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CACCTGTACACCTCCACCAC
Suggested primer 2:CACCGCTGACTGTACCTTGT