Insertion junction: CLIP2.047679_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047679
Chromosome:chromosome 10
Location:3384369
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g443801 (1 of 3) PF13401 - AAA domain (AAA_22) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGAATGGCGAGGGATACCTAGTCATTCCCATCATTCCCCCCACCCCAC
Internal bar code:TTTACGGCATTAGTAACGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:47
LEAP-Seq percent confirming:5.71429
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCATTGGAGGTCGGGAAA
Suggested primer 2:TACACACTGCAGGTCCGTTC