Insertion junction: CLIP2.047688_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047688
Chromosome:chromosome 3
Location:5684884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g186700 (1 of 7) IPR001606 - ARID DNA-binding domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGGCTTCGGCTCCATTGTGGCCGCGCGTCGCTGGGCTAACGCGTACCA
Internal bar code:TTGACATGTCGCTGGGTTAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:840
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AATGCGTCTAAATGGTGCGC
Suggested primer 2:TGGTGTTCTCAACAGAGGGC