Insertion junction: CLIP2.047691_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047691
Chromosome:chromosome 11
Location:779615
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467632 (1 of 1) IPR008979//IPR017853 - Galactose-binding domain-like // Glycoside hydrolase superfamily CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACCTTGGACCAGTCGGTTGACGGCACGCGGTGGCGAACGGCCAGGTAG
Internal bar code:TACCTATGCGACGCTATCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCTTGAGCTGGCAACCC
Suggested primer 2:CAAGTGTTGCGGTCATGTGG