Insertion junction: CLIP2.047697_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047697
Chromosome:chromosome 14
Location:154563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g608550 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAGTCCGCGATGTAACGGATGAGGTCCGGCGTGAGCTTTAGGAAACG
Internal bar code:CAGGCATCGCGTCTCGGTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:82
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:82

Suggested primers for confirmation by PCR

Suggested primer 1:GACAGGAGATTACTGGCGGG
Suggested primer 2:GCAGTTCTATGTCCCCCACC