Insertion junction: CLIP2.047700_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047700
Chromosome:chromosome 6
Location:3134660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275550 RWP2 (1 of 1) IPR003035//IPR003072 - RWP-RK domain // Orphan nuclear receptor, NOR1 type; RWP-RK transcription factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGAAATCGGCGCGAGGTCGTGACGGGGCGGGGCTTGCCTTGGGATC
Internal bar code:GTTACTAGTCGGCCGACTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2066
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTGCTTGTGTGCGAACA
Suggested primer 2:CAACGTGGCTTCCCAAACAG