Insertion junction: CLIP2.047706_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047706
Chromosome:chromosome 10
Location:5640922
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458850 SRR32 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGATTTAAGAGCACCAATAGCAACCCACCAGCCTCGGGAATCTGCAGCG
Internal bar code:TGTCGTCTTGGGGGCAGCGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1380
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATGAAGGCAGCAGGGAAGAC
Suggested primer 2:GTGCCAACCTACGTGTGAGA