Insertion junction: CLIP2.047707_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047707
Chromosome:chromosome 1
Location:4674239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g032350 PIG8 p53-induced protein/etoposide-induced protein 2.4; (1 of 1) K10134 - etoposide-induced 2.4 mRNA (EI24) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGACTCATGAACATGGCTCACACGGTGTCTTGCGCACGCAACAGGAG
Internal bar code:TGTAAAGGATAGTATGACGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3348
LEAP-Seq percent confirming:92.5
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:80

Suggested primers for confirmation by PCR

Suggested primer 1:AAGTAGCCTGAGGGAGGGAG
Suggested primer 2:CCATTCTTTTGGGCAGGTGC