Insertion junction: CLIP2.047708_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047708
Chromosome:chromosome 7
Location:6132240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g355700 (1 of 1) PTHR23329//PTHR23329:SF2 - TUFTELIN-INTERACTING PROTEIN 11-RELATED // ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCACTGCCCAGTGCGGGCCGCCGAACTCGGCAAGGCCCCCCGCAGCCT
Internal bar code:CTCTCAGATGGTCCACTTATAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1400
LEAP-Seq percent confirming:68.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:GGTTGTGGGTGGAGACGTAG
Suggested primer 2:CCAACACCACCACCAACAAC