Insertion junction: CLIP2.047712_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047712
Chromosome:chromosome 10
Location:3426513
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g444100 (1 of 2) PF04564//PF05049 - U-box domain (U-box) // Interferon-inducible GTPase (IIGP) (IIGP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGATATCGGCCATGCAGGTACGTGAAGCTCAGCGAGGCAATCGGCCAAA
Internal bar code:TAATAACCGCTATCCATAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1220
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:TTAAAAACCTGCCAGCGTGC
Suggested primer 2:ACGGCACCAAACGTACATCT