Insertion junction: CLIP2.047713_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047713
Chromosome:chromosome 8
Location:4158634
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383600 SRR21 Scavenger receptor cysteine rich (SRCR) protein; (1 of 1) IPR001190//IPR017448//IPR029062 - SRCR domain // SRCR-like domain // Class I glutamine amidotransferase-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCGTTGTTGTCTCTGGCCGGCGGCAGCTCGTGCGTGTCTATCTGCAGC
Internal bar code:GTTATGTAATTTAGTCCCGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:970
LEAP-Seq percent confirming:17.3913
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTGATGAAGAGCTGTGG
Suggested primer 2:GCCTAAGCAGGACCCAATGT