Insertion junction: CLIP2.047718_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047718
Chromosome:chromosome 1
Location:5887999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041950 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGAAATGGAGAGTTTCACGAACCTCATGTCTCCAGGCGCTGCGAGGTGC
Internal bar code:CGTTGGGACACTTTATGCGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1138
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCCTGTCCTAGCATCATC
Suggested primer 2:TTCAACCTTTCGCTTGCTGC