Insertion junction: CLIP2.047740_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047740
Chromosome:chromosome 1
Location:8003741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g057061 (1 of 1) PF08167 - rRNA processing/ribosome biogenesis (RIX1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCGTCCCAAACCGTAGCCCGCCTTCACCTCCGCCCTAACCCCCTTCAA
Internal bar code:CACAATACTTATCCCAGAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2521
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCATCTTCTCCCGTCAAA
Suggested primer 2:GTGAGGAGGGGTGGGAATTG