Insertion junction: CLIP2.047758_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047758
Chromosome:chromosome 17
Location:912106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702700 TPT28,TPT27 UMAMIT (Usually Multiple Acids Move In and Out Transporters) type transporter; (1 of 1) PTHR11132//PTHR11132:SF101//PTHR11132:SF125 - SOLUTE CARRIER FAMILY 35 // SUBFAMILY NOT NAMED // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGCGGCCGGCACTAGCACCCCAGCGGAGGAGCAGCTGGTTGCTTGCT
Internal bar code:ACGTCTCCGATCTTGTATTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1448
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGCAGCCTTGACTAACCA
Suggested primer 2:CTTGTGCTTGTCCCTTGTGC