Insertion junction: CLIP2.047763_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047763
Chromosome:chromosome 12
Location:9525478
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g540200 HEL58 (1 of 5) K12823 - ATP-dependent RNA helicase DDX5/DBP2 (DDX5, DBP2); DEAD/DEAH box helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCATCGGCTGCATGGGGTCAAGTCGGCGGGCGTCGGTTGCGGAGCACTA
Internal bar code:GAAGTAAACGCCAGTCTGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:874
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCTGCTTGGCCATCTTC
Suggested primer 2:GTCTTTCCTGCCTCTCCACC