Insertion junction: CLIP2.047771_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047771
Chromosome:chromosome 7
Location:5231811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g349152 (1 of 2) IPR000104//IPR011598 - Antifreeze protein, type I // Myc-type, basic helix-loop-helix (bHLH) domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACCTGGTCGGCGTGGGCCCACTAATGGAGAGCGGCGGAGGCGGCGA
Internal bar code:GGTCGATGAAATTGCGTAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1271
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGACTTGAGCTAGCTGCA
Suggested primer 2:GTCACACAACAGCAGCACAG