Insertion junction: CLIP2.047772_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047772
Chromosome:chromosome 6
Location:8726094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800758 (1 of 39) PTHR13078//PTHR13078:SF53 - FAMILY NOT NAMED // PROTEIN MAOC-1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGATGTTGGAGGGGTTATCTTGGTAGGGCCAACAGCGGACTCGCCACCG
Internal bar code:GGAGTATATCATATGTACCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1064
LEAP-Seq percent confirming:60.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGCTTTACGACGACGGC
Suggested primer 2:GGCAACCCAGCTTCAACTTG