Insertion junction: CLIP2.047777_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047777
Chromosome:chromosome 6
Location:2030443
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800622 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGGTGACGGCTGCGGTGCCGAGGGGGTTGACGTGGGGGAGGTGGCTA
Internal bar code:AGTACGATCATAGGAGTCTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1177
LEAP-Seq percent confirming:20.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGATCACCCCCAGCATT
Suggested primer 2:GTTGGCTGTGATGGACCTGA