Insertion junction: CLIP2.047777_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047777
Chromosome:chromosome 6
Location:2030444
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800622 (1 of 8) PF06011 - Transient receptor potential (TRP) ion channel (TRP) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCCCTGCCCCTCCAAGCCCATTCCTCTCCCCACTTCCTGTCTTTGCT
Internal bar code:CAAAAACCTCAACTTTCATCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:960
LEAP-Seq percent confirming:78.7879
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGCTGTGATGGACCTGA
Suggested primer 2:CACTGATCACCCCCAGCATT