Insertion junction: CLIP2.047777_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047777
Chromosome:chromosome 8
Location:3924594
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g382150 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTGAGGTGCTGGTAGACACGCCCGGTGTCAGGCTATCGGAGGAGGC
Internal bar code:CACGTAACGAACAGCGCCTTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2268
LEAP-Seq percent confirming:60.7143
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACGGCCTACCACTTAA
Suggested primer 2:TCCCAGTCCAAGTGTGATGC