Insertion junction: CLIP2.047779_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047779
Chromosome:plastome
Location:121920
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreCp.g802313 rbcL,ChreCp049,2717040 (1 of 1) K01601 - ribulose-bisphosphate carboxylase large chain (rbcL); RuBisCO large subunit CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACCACCGAACTGAAGACATGCGTCATCACCGAAGATTTCAACTAAAGC
Internal bar code:AGGGTAAGGTCGGCTCTGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1227
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACAACCATTCATGCGTTGGC
Suggested primer 2:TATACGTGCGACCCGATGTG